To address a vulnerability in a managed component that cannot be deleted, you can create a new component with the required security settings (e.g., setting "isExposed" to "false" if applicable). Then, remove all references to the old component and replace them with references to the new one. Afterward, resubmit the updated package for review.
If the component cannot be removed entirely, ensure that any unused or vulnerable code is removed from Visualforce pages, Apex classes, or other areas. Simply commenting out the code may not be sufficient.